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amap-align
Protein multiple alignment by sequence annealing
/Main/Debian/powerpc/science/AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation.The java visualisation tool of AMAP 2.2 is not yet packaged in Debian.
Info:
Homepage: - Package version: 2.2-1 Architecture: powerpc Distribution: Debian Filename: amap-align_2.2-1_powerpc.deb Browse inside amap-align_2.2-1_powerpc.deb:
pkg://amap-align_2.2-1_powerpc.deb:153074/ info downloads[DIR]usr/ 65535+ twin directories
693 B 2007-04-11md5sums view 189 mirrors
915 B 2007-04-11control view 324+ mirrorsDownload amap-align_2.2-1_powerpc.deb:
2007-04-11 ftp://ftp.linux.it/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.uni-frankfurt.de/pub/Mirrors3/debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://debian.lcs.mit.edu/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.kfki.hu/pub/linux/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.skynet.be/mirror1/debian.org/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.nz.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.uni-hannover.de/pub/mirror/linux/debian-mirror/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.port80.se/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.uni-koeln.de/mirrors/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.uni-kassel.de/Mirrors1/ftp.de.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://24.215.0.24/Debian/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.rfc822.org/pub/mirror/ftp.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.fr.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.cl.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://64.15.134.18/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.free.fr/.mirrors1/ftp.debian.org/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp13.freebsd.org/pub/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.ankara.edu.tr/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.fi.debian.org/pub/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://161.53.160.16/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.carnet.hr/misc/.ftp.hr.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.uni-stuttgart.de/pub/mirror/ftp.de.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://193.219.61.67/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.med.univ-tours.fr/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.sac.sk/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://64.50.238.52/.1/debian/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.crihan.fr/mirrors/ftp.debian.org/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://64.50.236.52/.1/debian/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.tiscali.nl/pub/mirror/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.demon.nl/disk3/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://147.52.159.12/mirrors/linux/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.wsisiz.edu.pl/pub/Linux/Debian/ftp.debian.org/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.fh-giessen.de/pub/linux/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://77.88.19.68/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-08 ftp://ftp.uni-wuppertal.de/pub/linux/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://200.17.202.1/debian-dists/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp2.sk.freebsd.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.uni-augsburg.de/mirrors/debian/ftp.de.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.lug.udel.edu/pub/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://200.17.202.16/debian-dists/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.tuke.sk/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2007-04-11 ftp://ftp.udc.es/mirror/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://sunsite.mff.cuni.cz/MIRRORS/ftp.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://217.75.96.164/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://mir1.ovh.net/lv0/ftp.debian.org/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.nfsi.pt/pub/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.tudelft.nl/pub/Linux/ftp.debian.org/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.bononia.it/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.li.kernel.org/pub/.3/ftp.debian.org/pub/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
2008-04-09 ftp://ftp.uni-kl.de/pub/linux/debian/pool/main/a/amap-align/amap-align_2.2-1_powerpc.deb
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