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amap-align

Protein multiple alignment by sequence annealing

/Main/Debian/powerpc/science/

AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation.

Homepage: http://bio.math.berkeley.edu/amap/

Info:

Homepage:	-
Package version:	2.0-2
Architecture:	powerpc
Distribution:	Debian
Filename:	amap-align_2.0-2_powerpc.deb

Browse inside amap-align_2.0-2_powerpc.deb:

pkg://amap-align_2.0-2_powerpc.deb:123652/  info  downloads

[DIR]usr/  65535+ twin directories
526 B  2006-04-06md5sums  view  451+ mirrors
821 B  2006-04-06control  view  546+ mirrors

Download amap-align_2.0-2_powerpc.deb:

2006-04-06  ftp://sapi.vlsm.org/.1/debian/pool/main/a/amap-align/amap-align_2.0-2_powerpc.deb
2007-04-05  ftp://ftp.rz.uni-kiel.de/pub2/linux/debian/pool/main/a/amap-align/amap-align_2.0-2_powerpc.deb
2007-04-05  ftp://ftp.itb.ac.id/pub/debian/pool/main/a/amap-align/amap-align_2.0-2_powerpc.deb
2007-04-05  ftp://ftp.uvigo.es/pub/linux/distribuciones/debian/pool/main/a/amap-align/amap-align_2.0-2_powerpc.deb