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clustalw

global multiple nucleotide or peptide sequence alignment

/Main/Debian/powerpc/non-free/science/

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

For details and citation purposes see paper "Clustal W and Clustal X version 2.0", Larkin M., et al. Bioinformatics 2007 23(21):2947-2948

Info:

Homepage:	-
Package version:	2.0.9-1
Architecture:	powerpc
Distribution:	Debian
Filename:	clustalw_2.0.9-1_powerpc.deb

Browse inside clustalw_2.0.9-1_powerpc.deb:

Download clustalw_2.0.9-1_powerpc.deb:

2007-06-25  ftp://ftp.linux.it/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-frankfurt.de/pub/Mirrors3/debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://debian.lcs.mit.edu/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.kfki.hu/pub/linux/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.skynet.be/mirror1/debian.org/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.nz.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-stuttgart.de/pub/mirror/ftp.de.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-hannover.de/pub/mirror/linux/debian-mirror/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.port80.se/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.kulnet.kuleuven.ac.be/mirror/ftp.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-koeln.de/mirrors/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-kassel.de/Mirrors1/ftp.de.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://24.215.0.24/Debian/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.rfc822.org/pub/mirror/ftp.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.fr.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.cl.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://64.15.134.18/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.free.fr/.mirrors1/ftp.debian.org/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp13.freebsd.org/pub/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.ankara.edu.tr/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.fi.debian.org/pub/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://161.53.160.16/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.carnet.hr/misc/.ftp.hr.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://193.219.61.67/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.med.univ-tours.fr/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.sac.sk/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://64.50.238.52/.1/debian/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.crihan.fr/mirrors/ftp.debian.org/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://64.50.236.52/.1/debian/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.tiscali.nl/pub/mirror/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.demon.nl/disk3/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://147.52.159.12/mirrors/linux/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.wsisiz.edu.pl/pub/Linux/Debian/ftp.debian.org/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.fh-giessen.de/pub/linux/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://77.88.19.68/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://200.17.202.1/debian-dists/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp2.sk.freebsd.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.uni-augsburg.de/mirrors/debian/ftp.de.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.lug.udel.edu/pub/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://200.17.202.16/debian-dists/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.tuke.sk/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2007-06-25  ftp://ftp.udc.es/mirror/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://217.75.96.164/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://mir1.ovh.net/lv0/ftp.debian.org/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.nfsi.pt/pub/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.tudelft.nl/pub/Linux/ftp.debian.org/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.bononia.it/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.li.kernel.org/pub/.3/ftp.debian.org/pub/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.uni-kl.de/pub/linux/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb
2008-06-23  ftp://ftp.ula.ve/linux/distribuciones/debian/pool/non-free/c/clustalw/clustalw_2.0.9-1_powerpc.deb