dialign-t
Segment-based multiple sequence alignment
/Main/Debian/ia64/science/DIALIGN-T is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2. For pairwise
alignment, DIALIGN-T uses a fragment-chaining algorithm that favours chains of
low-scoring local alignments over isolated high-scoring fragments. For
multiple alignment, DIALIGN-T uses an improved greedy procedure that is less
sensitive to spurious local sequence similarities.
DIALIGN-T has been published in Amarendran R. Subramanian, Jan Weyer-Menkhoff,
Michael Kaufmann, Burkhard Morgenstern: DIALIGN-T: An improved algorithm for
segment-based multiple sequence alignment. BMC Bioinformatics 2005, 6:66.
Info:
| Homepage: | - |
| Package version: | 0.2.2.dfsg-1 |
| Architecture: | ia64 |
| Distribution: | Debian |
| Filename: | dialign-t_0.2.2.dfsg-1_ia64.deb |
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